FastQCFastQC Report
Wed 4 Jan 2023
EGAF00007277431

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007277431
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6173195
Sequences flagged as poor quality0
Sequence length76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA1833302.9697749706594396No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCAACTGTAGGCACCATCAAT1806282.926005091366788No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCAACTGTAGGCACCATCAA1339832.170399606686651No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGAACTGTAGGCACCATCAATA922661.4946231246542512No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGAACTGTAGGCACCATCAATC823491.333976976265937No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGAACTGTAGGCACCATCAATT777951.2602064247120008No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGAACTGTAGGCACCATCAATG507680.8223942383158154No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTAACTGTAGGCACCATCA352210.570547342178564No Hit
GCGCCGCTGGTGTAGTGGTATCATGCAAGATTAACTGTAGGCACCATCAA323610.5242180102847876No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCAACTGTAGGCACCATCAAT300620.4869763550317137No Hit
GCCGTGATCGTATAGTGGTTAGTACTCTGCGAACTGTAGGCACCATCAAT224450.3635880609635691No Hit
GTTTCCGTAGTGTAGCGGTTATCACATTCGCCAACTGTAGGCACCATCAA203200.32916504338515146No Hit
GTTTCCGTAGTGTAGTGGTCATCACGTTCGCAACTGTAGGCACCATCAAT179120.29015768981864337No Hit
CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC165590.26824035203812613No Hit
GTTTCCGTAGTGTAGCGGTTATCACATTCGCAACTGTAGGCACCATCAAT149090.2415118913301783No Hit
GCTTCTGTAGTGTAGTGGTTATCACGTTCGCAACTGTAGGCACCATCAAT146580.23744592548915108No Hit
GTTTCCGTAGTGTAGTGGTCATCACGTTCGCCAACTGTAGGCACCATCAA135210.21902758620131066No Hit
GTTTCCGTAGTGTAGCGGTTATCACATTCGAACTGTAGGCACCATCAATA129060.20906515993743918No Hit
GCTTCTGTAGTGTAGTGGTTATCACGTTCGCCAACTGTAGGCACCATCAA126080.2042378379429129No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC124900.2023263480256172No Hit
GTTTCCGTAGTGTAGTGGTCATCACGTTCGAACTGTAGGCACCATCAATA122470.19838997472135578No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTAACTGTAGGCACCATCAA121890.1974504288298037No Hit
GCATGGGTGGTTCAGTGGTAGAATTCTCGCCAACTGTAGGCACCATCAAT116160.1881683633839527No Hit
GTTTCCGTAGTGTAGCGGTTATCACATTCGAACTGTAGGCACCATCAATT110200.17851371939490004No Hit
GTTTCCGTAGTGTAGTGGTCATCACGTTCGAACTGTAGGCACCATCAATC108280.17540349851252066No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCAACTGTAGGCACCATCAATA107750.1745449479564472No Hit
GTTTCCGTAGTGTAGTGGTCATCACGTTCGAACTGTAGGCACCATCAATT103620.16785473324591238No Hit
GTTTCCGTAGTGTAGCGGTTATCACATTCGAACTGTAGGCACCATCAATC98520.15959320902709215No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCAACTGTAGGCACCATCAATC92930.15053793052058131No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCAACTGTAGGCACCATCAATT92640.15006815757480527No Hit
GCTTCTGTAGTGTAGTGGTTATCACGTTCGAACTGTAGGCACCATCAATC81470.13197379962887937No Hit
GTTTCCGTAGTGTAGTGGTCATCACGTTCGCCTAACTGTAGGCACCATCA79990.12957633769871194No Hit
GCTTCTGTAGTGTAGTGGTTATCACGTTCGAACTGTAGGCACCATCAATA79510.12879878247811707No Hit
GTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAA69810.1130856873952629No Hit
GTTTCCGTAGTGTAGCGGTTATCACATTCGAACTGTAGGCACCATCAATG69740.11297229392559284No Hit
GCTTCTGTAGTGTAGTGGTTATCACGTTCGAACTGTAGGCACCATCAATT68480.11093121147153136No Hit
GTTTCCGTAGTGTAGTGGTCATCACGTTCGAACTGTAGGCACCATCAATG65750.10650886615439818No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)