FastQCFastQC Report
Wed 4 Jan 2023
EGAF00007277452

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007277452
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6649619
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTAACTGTAGGCACCATCA3778605.6824308279918No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTAACTGTAGGCACCATCAA3121264.693892988455429No Hit
GCTTCTGTAGTGTAGTGGTTATCACGTTCGCCTAACTGTAGGCACCATCA929771.398230485084935No Hit
GCATGGGTGGTTCAGTGGTAGAATTCTCGCCTAACTGTAGGCACCATCAA813161.222867054488385No Hit
GCGCCGCTGGTGTAGTGGTATCATGCAAGATTAACTGTAGGCACCATCAA740021.1128757903272353No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCAACTGTAGGCACCATCAA655810.9862369558316048No Hit
GTTTCCGTAGTGTAGTGGTCATCACGTTCGCCTAACTGTAGGCACCATCA327280.4921785744416334No Hit
GTTTCCGTAGTGTAGCGGTTATCACATTCGCCTAACTGTAGGCACCATCA320040.4812907325968601No Hit
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA309410.46530485430819424No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCAACTGTAGGCACCATCAA306790.4613647789444779No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCAACTGTAGGCACCATCAAT304220.45749989585869505No Hit
TCCCACATGGTCTAGCGGTTAGGATTCCTGGTTTAACTGTAGGCACCATC215510.32409375634904797No Hit
GCCCGGATAGCTCAGTCGGTAGAGCATCAGACAACTGTAGGCACCATCAA206480.31051403095425467No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCAACTGTAGGCACCATCAATA198290.2981975358287445No Hit
GCTTCTGTAGTGTAGTGGTTATCACGTTCGCCAACTGTAGGCACCATCAA195820.2944830372988287No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCAACTGTAGGCACCATCAATT173180.2604359738505319No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCAACTGTAGGCACCATCAATC157750.23723163688024831No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCAACTGTAGGCACCATCAAT156770.23575786823275138No Hit
GCCCGGATAGCTCAGTCGGTAGAGCATCAGACTAACTGTAGGCACCATCA156600.23550221448777742No Hit
TCCCTGTGGTCTAGTGGTTAGGATTCGGCGCAACTGTAGGCACCATCAAT150760.22671975642514253No Hit
GCATTGTGGTTCAGTGGTAGAATTCTCGCCTAACTGTAGGCACCATCAAT128740.19360507722322137No Hit
GTTTCCGTAGTGTAGCGGTTATCACATTCGCCAACTGTAGGCACCATCAA128010.192507269965392No Hit
GCATTTGTGGTTCAGTGGTAGAATTCTCGCCTAACTGTAGGCACCATCAA119380.17952908279406685No Hit
GCGTTGGTGGTATAGTGGTTAGCATAGCTGCCTAACTGTAGGCACCATCA114520.17222039337892892No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTAACTGTAGGCACCATCA114320.17191962426719487No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCAACTGTAGGCACCATCAATG113390.17052104789763142No Hit
TCCCATATGGTCTAGCGGTTAGGATTCCTGGTTTAACTGTAGGCACCATC108380.16298678164869296No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGAACTGTAGGCACCATCAAT107160.16115209006711514No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTAACTGTAGGCACCATCA103640.15585855370059548No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGAACTGTAGGCACCATCAATAA89480.13456410058982327No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACAACTGTAGGCACCATCAA87650.13181206321745653No Hit
TCCCACATGGTCTAGCGGTTAGGATTCCTGGTTAACTGTAGGCACCATCA83990.126307988472723No Hit
GGTTCCATAGTGTAGTGGTTATCACGTCTGCTTAACTGTAGGCACCATCA83690.12585683480512191No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATAACTGTAGGCACCAT81620.12274387449867429No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACAACTGTAGGCACCATCAA75090.11292376300055687No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGAACTGTAGGCACCATCAATTA74040.111344725163953No Hit
GCTTCTGTAGTGTAGTGGTTATCACGTTCGCAACTGTAGGCACCATCAAT71270.10717907296643613No Hit
GCGTTGGTGGTATAGTGGTTAGCATAGCTGCCTTAACTGTAGGCACCATC68510.10302845922450594No Hit
CGGTTCTATTTTGTTGGTTTTCGGAACTGAGAACTGTAGGCACCATCAAT68100.1024118825454511No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGAACTGTAGGCACCATCAATA67650.10173515204404944No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)