FastQCFastQC Report
Wed 4 Jan 2023
EGAF00007277460

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007277460
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5773698
Sequences flagged as poor quality0
Sequence length76
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGCCGCTGGTGTAGTGGTATCATGCAAGATTAACTGTAGGCACCATCAA723121.2524382120436504No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTAACTGTAGGCACCATCAA601021.040961962333326No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGAACTGTAGGCACCATCAATAA566480.9811389511540092No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCAACTGTAGGCACCATCAAT495590.8583580228823884No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGAACTGTAGGCACCATCAATTA460120.79692425894115No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGAACTGTAGGCACCATCAATAC430270.7452242912601248No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGAACTGTAGGCACCATCAATCC420710.7286664456644598No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGAACTGTAGGCACCATCAATTT403990.6997075357942172No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGAACTGTAGGCACCATCAATAT379080.6565636096657637No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGAACTGTAGGCACCATCAATCA359510.6226685219767296No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGAACTGTAGGCACCATCAATGA345020.5975719547506642No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGAACTGTAGGCACCATCAATTC336370.582590222072578No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGAACTGTAGGCACCATCAATAG332000.5750214160837647No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGAACTGTAGGCACCATCAATCG289710.5017754652217695No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGAACTGTAGGCACCATCAATTG264700.458458339871604No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGAACTGTAGGCACCATCAATGT257350.4457281970757736No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGAACTGTAGGCACCATCAATGC218110.37776482247599374No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGAACTGTAGGCACCATCAATCT204980.35502376466521113No Hit
GCATGGGTGGTTCAGTGGTAGAATTCTCGCCTAACTGTAGGCACCATCAA156310.27072770345799174No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCAACTGTAGGCACCATCAATA141720.24545793701021426No Hit
GCCCGGATAGCTCAGTCGGTAGAGCATCAGACAACTGTAGGCACCATCAA131600.22793017577296212No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGAACTGTAGGCACCATCAATGG121980.21126841064426993No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCAACTGTAGGCACCATCAATT121860.21106057157821556No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATAAAA121860.21106057157821556No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCAACTGTAGGCACCATCAATC114970.19912714520226032No Hit
GCATGGGTGGTTCAGTGGTAGAATTCTCGCCAACTGTAGGCACCATCAAT107920.1869166000715659No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTAACTGTAGGCACCATCA95310.1650761782136856No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATCCCC90790.1572475733923042No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATTAAA89540.1550825831209045No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATAAAC86860.1504408439790235No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATATAA84340.14607622359188166No Hit
GCCCGGATAGCTCAGTCGGTAGAGCATCAGAAACTGTAGGCACCATCAAT83380.1444135110634467No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATAATA82460.1428200782236965No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATAACA81930.141902122348623No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCAACTGTAGGCACCATCAATG78310.13563231052264943No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATACAA75350.13050561355997492No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATGAAA74810.12957033776273022No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATTTAA73120.1266432709157978No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATCGAC69750.12080645714410418No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATAAGA69590.12052933838936503No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATCGCC69400.12020025986811227No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATCACC69270.11997510087988668No Hit
GCATGGGTGGTTCAGTGGTAGAATTCTCGAACTGTAGGCACCATCAATAA68750.11907446492698441No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATAGAC68700.11898786531612841No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATACAG67580.11704803403295427No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATAAAT67370.11668431566735911No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATTAAC66950.11595687893616881No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATAAAG66230.11470984453984259No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATAACG65730.11384384843128269No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATTATA65320.11313373162226358No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATTACA64110.11103802103954866No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATTCAA63000.10911550967854572No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATAACC62730.10864787177992338No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATCAAA62270.10785115536004829No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATACCC61930.10726227800622755No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATTTTA61730.1069158795628036No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATATAC61680.1068292799519476No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATACGT61530.10656948111937964No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATTTTT60350.1045257303031783No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATATCC59660.10333065567336566No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATACGA59400.10288033769691451No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATCAAC59150.10244733964263458No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATCCGC58620.1015293837675611No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATTAAT58360.10107906579110996No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATTCCC58020.10049018843728923No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTAACTGTAGGCACCATCAATTAGA57750.10002255053866689No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)