FastQCFastQC Report
Wed 4 Jan 2023
EGAF00007277524

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007277524
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7496487
Sequences flagged as poor quality0
Sequence length76
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATTGGTGGTTCAGTGGTAGAATTCTCGCAACTGTAGGCACCATCAATA509950.6802519633529678No Hit
GCGCCGCTGGTGTAGTGGTATCATGCAAGATTAACTGTAGGCACCATCAA481600.642434249535816No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCAACTGTAGGCACCATCAATT451640.6024688630821343No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCAACTGTAGGCACCATCAATC406430.5421606146985914No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCAACTGTAGGCACCATCAAT317890.42405195927105593No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCAACTGTAGGCACCATCAATG293060.3909297781747637No Hit
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA239850.3199498645165395No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATAACTGTAGGCACCAT137330.18319247402149835No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTAACTGTAGGCACCATCA126640.1689324612982054No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCAACTGTAGGCACCATCAA119540.15946135836692574No Hit
GCCCGGATGATCCTCAGTGGTCTGGGGTGCAGGAACTGTAGGCACCATCA108610.14488119568539237No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTAACTGTAGGCACCATCAA83040.11077188555119219No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGAACTGTAGGCACCATCAATAA81220.10834408170120217No Hit
GTTTCCGTAGTGTAGCGGTTATCACATTCGCCAACTGTAGGCACCATCAA80730.10769044220312796No Hit
GTTTCCGTAGTGTAGCGGTTATCACATTCGCAACTGTAGGCACCATCAAT80570.10747700889763433No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)