FastQCFastQC Report
Wed 2 Nov 2022
EGAF00007294576

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007294576
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8607243
Sequences flagged as poor quality0
Sequence length35-151
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGTACCCATAATACAGTGAGCCCACCTTCCTGGTCCCCAGACATTTCAG174110.2022831236436569No Hit
TTGGAGGTGTCTTGAGTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTG136300.1583550040355547No Hit
GAATGTAAATGCAATTTTATTTACCACTTTGATGCTCCAAATGGCACTGC124370.14449458438666132No Hit
GGAGTCTTCCTGGGTCAGTTGCCTTCCCACAGGCCTCACACACAGTGCAC116740.1356299572348544No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN114960.13356193150350235No Hit
CACCTTGGAGCCACTATCAAATGCTGTGAAGAGAAATGTACCCAGATGTA104970.121955427539341No Hit
GGCACAAGGAAGCGCTCTTGACTCGGCATGGTACCATGACTACCTCCTGG104000.12082846969697497No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)