FastQCFastQC Report
Fri 13 Jan 2023
EGAF00007326640

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007326640
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69402337
Sequences flagged as poor quality0
Sequence length75
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCTCCTAATGACCTCCG836110.12047288839855637No Hit
CCCAAACCCACTCCACCTTACTACCAGATAACCTTAACCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAA828930.11943834110370087No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCTCCTAATGACCTC743310.10710158074359946No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)