FastQCFastQC Report
Sun 9 Jul 2023
EGAF00007335276

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007335276
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4004531
Sequences flagged as poor quality0
Sequence length8-150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCAACCTTCTAGGTAACGACCACATCTACAACGTTATCGTCACAGCCC226810.566383429170607No Hit
CGGCCCCCCATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTC94140.235083708928711No Hit
AGGCCACCTACGGTGAAAAGAAAGATGAATCCTAGGGCTCAGAGCACTGC89030.22232316343661715No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCATGGCACATGCAGCGCAAGTAGG72350.1806703456659469No Hit
TGGCATTGTATTAGCAAACTCATCACTAGACATCGTACTACACGACACGT46310.11564400425418107No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43740.1092262739381965No Hit
TCTATTAGCATTTTTGTGAAGAGGCCTCTGAGTCTGAGTCCTTTGTTAGC41160.10278357190892018No Hit
CGGCCCCCCATGACCCACCAATCACATGCCTATCATATAGTAAAACCCAG40800.1018845902304165No Hit
TGGCAATACCTTTTGGCTTCCAGGGAAGTTCAAGGCAATAGAGAAGGAGG40460.10103555197849637No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)