FastQCFastQC Report
Sun 9 Jul 2023
EGAF00007335292

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007335292
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9494745
Sequences flagged as poor quality0
Sequence length8-150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCAGGGTGGTATTTCAAGGATGGCTCCACAGACACTGGCGTGCCTGCTT442610.4661631249707075No Hit
CGGCCCCCCTTGAAAAGCCAGGGGATGACTTGTGGATAGGGGTGAAAGGC302030.31810227657509493No Hit
CGGCCCCCCAATGAAGTGCACATGGTGGATGCCTTGGCAGTCAGAGGCGA240080.25285565857745523No Hit
TGTTGGGGTTCTAACTCAAGCTTAACAGAGCTGAGGACAATGTATGGTGG238770.251475948011242No Hit
TGGCGCACGGGTGCGTAACGCGTGGGAATCTGCCCTCAGGTTCGGAATAA224750.23670988531024265No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCATAACGGTCCTAAGGTAGCGAAA217970.22956909321945979No Hit
TGGCATAACCTTCTCCGTCCCTCCATCGCATCATAAACAAGTATCGGAAT217330.22889503614894344No Hit
TGCGCCACTAAAGTCTCAAGGACCCCAACGGCTAGTAGACATCGTTTACG214550.22596710074888793No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCTTGAAAAGCCAGGGGATGACTTG209640.22079581916102012No Hit
GAACTAGGCAAAATGGTACCGTAACTTCGGGAGAAGGTACGCTGCCGATG205280.21620380536812733No Hit
GTTGGGGTTCTAACTCAAGCTTAACAGAGCTGAGGACAATGTATGGTGGG176390.18577644791934908No Hit
CGGCCCCCCATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTT174870.1841755623768727No Hit
TACCAGGGTGGTATTTCAAGGATGGCTCCACAGACACTGGCGTGCCTGCT166990.1758762346961398No Hit
AACTAGGCAAAATGGTACCGTAACTTCGGGAGAAGGTACGCTGCCGATGG144230.1519050801259012No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCAATGAAGTGCACATGGTGGATGC137730.14505918800346929No Hit
CGGCCCCCCATTGAACGCTGGCGGCAGGCTTAACACATGCAAGTCGAACG128450.13528536048098186No Hit
TGGCGATGGTTGTCCAAGTGGAAGGATGTAGTTAGGTTTAGTAGGCAAAT112370.11834967658425792No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG104930.11051376313950506No Hit
AGGCAACCTTCTAGGTAACGACCACATCTACAACGTTATCGTCACAGCCC99380.10466842448112089No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCATTGAACGCTGGCGGCAGGCTTA96620.101761553364519No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)