FastQCFastQC Report
Sun 9 Jul 2023
EGAF00007335296

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007335296
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4682535
Sequences flagged as poor quality0
Sequence length8-150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCAACCTTCTAGGTAACGACCACATCTACAACGTTATCGTCACAGCCC139020.2968904663819918No Hit
CGGCCCCCCATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTC91560.19553511078934807No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCATGGCACATGCAGCGCAAGTAGG59680.12745233084216137No Hit
AGGCCACCTACGGTGAAAAGAAAGATGAATCCTAGGGCTCAGAGCACTGC49640.10601095346858058No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)