FastQCFastQC Report
Sun 9 Jul 2023
EGAF00007335300

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007335300
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5667857
Sequences flagged as poor quality0
Sequence length8-150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCTCTACGAGACTCAAGCTTGCCAGTATCAGATGCAGTTCCCAGGTT4382487.732164026015477No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCTGAGACACGGTCCAGACTCCTAC360090.6353194867125265No Hit
AGGCAACCTTCTAGGTAACGACCACATCTACAACGTTATCGTCACAGCCC351790.6206755039867802No Hit
CCCCTCTACGAGACTCAAGCTTGCCAGTATCAGATGCAGTTCCCAGGTTG351690.620499070459964No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCGACACGGTCCAGACTCCTACGGG289770.5112514306553606No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCATGGCACATGCAGCGCAAGTAGG273910.4832690733023081No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCACGGTCCAGACTCCTACGGGAGG235040.4146893614288434No Hit
CGGCCCCCCATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTC204220.3603125484640844No Hit
AGAATTCCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAATACCGG188950.33337114891924763No Hit
GTTCCTTCAGGACTCTCAAGGAGTCAGGGAGAACTCATCTCGGGGCAAGT160190.28262886660690273No Hit
GGGCACAACCTCCAAGTCGACATCGTTTACGGCGTGGACTACCAGGGTAT137970.2434253369483387No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCATGACCCACCAATCACATGCCTA133900.23624449240691853No Hit
CCGGAAGCCACGCCTCAAGGGCACAACCTCCAAGTCGACATCGTTTACGG105210.18562571356334504No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCGGTTAAGCGACTAAGCGTACACG104740.18479647598730878No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCAGCAGTGGGGAATATTGCACAAT101660.1793623233613692No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCGCTAAACCTAGCCCCAAACCCAC94710.16710019324764194No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCATTGCACAATGGGCGCAAGCCTG85670.15115060242345563No Hit
AGGCCACCTACGGTGAAAAGAAAGATGAATCCTAGGGCTCAGAGCACTGC84290.1487158197533918No Hit
TTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTGACCACCTGT82290.1451871492170674No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCTGATGTTCGCCGACCGTTGACTA80440.14192312897096734No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCACTGGAACTGAGACACGGTCCAG76620.13518336824658775No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCTTGCACAATGGGCGCAAGCCTGA75510.1332249560989277No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCTAGGGACCTGTATGAATGGCTCC75020.1323604318175282No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCTGGAACTGAGACACGGTCCAGAC71540.12622054508432376No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCACACGGTCCAGACTCCTACGGGA65360.11531695312708137No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCTGGGCGCAAGCCTGATGCAGCCA63320.11171770918003048No Hit
TCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTGACCACCTGTG56740.10010838311552321No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)