FastQCFastQC Report
Sun 9 Jul 2023
EGAF00007335316

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007335316
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5303185
Sequences flagged as poor quality0
Sequence length8-150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCTCTACGAGACTCAAGCTTGCCAGTATCAGATGCAGTTCCCAGGTT1337532.5221258545572143No Hit
GGGCACAACCTCCAAGTCGACATCGTTTACGGCGTGGACTACCAGGGTAT277620.5234967288525669No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCATGGCACATGCAGCGCAAGTAGG133610.2519429361789189No Hit
AGAATTCCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAATACCGG124450.23467029718933058No Hit
AGGCAACCTTCTAGGTAACGACCACATCTACAACGTTATCGTCACAGCCC116720.22009415096776747No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCTGAGACACGGTCCAGACTCCTAC113790.21456916928223324No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCACGGTCCAGACTCCTACGGGAGG98100.18498317520508903No Hit
CCCCTCTACGAGACTCAAGCTTGCCAGTATCAGATGCAGTTCCCAGGTTG98060.18490774883395544No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCGACACGGTCCAGACTCCTACGGG80530.15185214168466687No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCGGTTAAGCGACTAAGCGTACACG74700.1408587480919485No Hit
CGGCCCCCCATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTC70820.13354239009199187No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCTGATGTTCGCCGACCGTTGACTA70460.13286355275178974No Hit
CCGGAAGCCACGCCTCAAGGGCACAACCTCCAAGTCGACATCGTTTACGG66990.1263203150559522No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCAAATTGAAGAGTTTGATCATGGC59110.11146131994263825No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCGATTCCTGAAGCTGACAGCATTC55870.1053517838808188No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)