FastQCFastQC Report
Sun 9 Jul 2023
EGAF00007335474

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007335474
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3301478
Sequences flagged as poor quality0
Sequence length8-150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAACTGCGAGTGTAGAGGTGAAATTCGTAGATATTCGCAAGAACACCAG148410.4495259395943272No Hit
TCACCTCTCCCGAACTCAAGATCTTCAGTATCAAAGGCAGTTCTGGAGTT142740.4323518133393589No Hit
AGATGTAACGGGGCTCAAGCCACGAGCCGAAGCTTAGGGTGTGATCCGCA136870.4145718977985011No Hit
AGAGCGAACGCTGGCGGCAGGCTTAACACATGCAAGTCGAGCGGGCATAG121560.3681987279636575No Hit
TCAACATAGTTCTCTCAAGCGCCTTGGTATACTCTACCAGTCCACCTGTG120720.36565441296292145No Hit
TTCAACATAGTTCTCTCAAGCGCCTTGGTATACTCTACCAGTCCACCTGT116570.3530842852807137No Hit
CACCTCTCCCGAACTCAAGATCTTCAGTATCAAAGGCAGTTCTGGAGTTG98430.29813919705053316No Hit
AAGATGTAACGGGGCTCAAGCCACGAGCCGAAGCTTAGGGTGTGATCCGC35050.10616457235214047No Hit
TGGCTGATCATGCTCTCACATCAGCTACTGATCGAAGGCTTGGTGGGCCT33520.10153028431508554No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)