FastQCFastQC Report
Sun 9 Jul 2023
EGAF00007335612

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007335612
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3826404
Sequences flagged as poor quality0
Sequence length8-150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCAACCTTCTAGGTAACGACCACATCTACAACGTTATCGTCACAGCCC137620.3596588337248236No Hit
AGGCCACCTACGGTGAAAAGAAAGATGAATCCTAGGGCTCAGAGCACTGC97130.25384146577308614No Hit
CGGCCCCCCATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTC59430.1553155390805571No Hit
TGGCATTGTATTAGCAAACTCATCACTAGACATCGTACTACACGACACGT48990.12803143630416444No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG39460.10312554555138453No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)