FastQCFastQC Report
Sun 9 Jul 2023
EGAF00007335634

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007335634
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6094985
Sequences flagged as poor quality0
Sequence length8-150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCAACCTTCTAGGTAACGACCACATCTACAACGTTATCGTCACAGCCC497920.8169339219046479No Hit
CGGCCCCCCATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTC259790.42623566752010056No Hit
AGGCCACCTACGGTGAAAAGAAAGATGAATCCTAGGGCTCAGAGCACTGC232690.38177288377247853No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCATGGCACATGCAGCGCAAGTAGG212510.3486636964652087No Hit
TGGCATTGTATTAGCAAACTCATCACTAGACATCGTACTACACGACACGT192570.3159482755084713No Hit
GACTGTGAGTGCGTTCGTAGTTTGAGTTTGCTAGGCAGAATAGTAATGAG153010.25104245539570647No Hit
TCAGAATTCATGCCCCCCCGGCCCCCCATGACCCACCAATCACATGCCTA151880.24918847216194953No Hit
CGGCCCCCCATGACCCACCAATCACATGCCTATCATATAGTAAAACCCAG151350.24831890480452373No Hit
ATCATAATCCTCTCTCAAGGACTTCAAACTCTACTCCCACTAATAGCTTT134180.22014820381018166No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)