FastQCFastQC Report
Wed 22 Feb 2023
EGAF00007354911

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007354911
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17653537
Sequences flagged as poor quality0
Sequence length23-75
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCTAATCCATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA1294530.7332978088187087TruSeq Adapter, Index 22 (97% over 37bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG184050.10425672770278274No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)