FastQCFastQC Report
Sat 18 Mar 2023
EGAF00007358402

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007358402
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75671918
Sequences flagged as poor quality0
Sequence length101-151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGCTCGCTATCTCGTAT10415731.3764326681927106TruSeq Adapter, Index 14 (97% over 38bp)
ATCGGAAGAGCACACGTCTGAACTCCAGTCACAGCTCGCTATCTCGTATG7967341.0528793521528026TruSeq Adapter, Index 14 (97% over 37bp)

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)