FastQCFastQC Report
Sat 18 Mar 2023
EGAF00007358420

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007358420
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87530124
Sequences flagged as poor quality0
Sequence length101-151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGCGGCGTATCTCGTAT6230980.7118669225237245TruSeq Adapter, Index 11 (97% over 36bp)
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTGCGGCGTATCTCGTATG3834710.43810174426349496TruSeq Adapter, Index 11 (97% over 35bp)

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)