FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007358470

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007358470
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60944359
Sequences flagged as poor quality0
Sequence length101-151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCATTCGAATCTCGTAT6671151.0946296112491725TruSeq Adapter, Index 23 (97% over 39bp)
ATCGGAAGAGCACACGTCTGAACTCCAGTCACCCATTCGAATCTCGTATG3489260.5725320697851626TruSeq Adapter, Index 23 (97% over 38bp)

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)