FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007358480

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007358480
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45909391
Sequences flagged as poor quality0
Sequence length125-151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTACCGAGGATCTCGTAT1343280.2925937309863248TruSeq Adapter, Index 10 (97% over 37bp)
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTACCGAGGATCTCGTATG1150450.25059143128254524TruSeq Adapter, Index 10 (97% over 36bp)

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)