FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007358488

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007358488
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53839005
Sequences flagged as poor quality0
Sequence length125
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCTTGTCAATCTCGTAT8095301.5036124831801776TruSeq Adapter, Index 8 (97% over 38bp)
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGCTTGTCAATCTCGTATG3943680.7324949634563269TruSeq Adapter, Index 8 (97% over 37bp)

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)