FastQCFastQC Report
Wed 16 Nov 2022
EGAF00007420782

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007420782
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences204006085
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTCGTTATCGGAATTAACCAGACA2262210.11088933940377318No Hit
GCTGCGGATATGGGTACGGCCCGGCG2244720.11003201203532728No Hit
AAGCCGCAGGCTCCACTCCTGGTGGT2187510.10722768391933014No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)