FastQCFastQC Report
Tue 15 Nov 2022
EGAF00007420796

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007420796
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21261571
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGGTCGCGTAACTAGTTAGCATGC713300.33548790914838794No Hit
GGGTTGCGTAACTAGTTAGCATGCCA592440.2786435677777526No Hit
GTCTCGTTCGTTATCGGAATTAACCA556830.2618950405875464No Hit
TGTCCCATTGGCTCCTCAGCCAAGCA511080.24037734558749208No Hit
ACACCAAATGTCTGAACCTGCGGTTC422560.19874354533820668No Hit
CGTTCGTTATCGGAATTAACCAGACA336780.15839845512826872No Hit
AGTTGGTTGATTGTAGATATTGGGCT273950.12884748732819412No Hit
TTGCCGTATCGTTCCGCCTGGGCGGG270760.12734712782982968No Hit

[OK]Adapter Content

Adapter graph