FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007457043

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007457043
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60727926
Sequences flagged as poor quality0
Sequence length75
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTATGGCCCGGGGGATCCTAGAGACCATTCGCGATTCCATGAGACTCCAAGGGTTCTGCACAACTTATGCACCT651560.10729166018282922No Hit
GGGGGATCCTAGAGACCATTCGCGATTCCATGAGACTCCAAGGGTTCTGCACAACTTATGCACCTCTATTAGATC623930.10274185882784799No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)