FastQCFastQC Report
Tue 30 May 2023
EGAF00007498422

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007498422
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2581
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGATGGCTACACCCGCCCACCCCAGCTCCAACCTGGCCTCAGAGGCCGTA40.15497869043006587No Hit
AAAAAAAGAATTGTTTTAAATCTCAAAACTGAAGAAAAATATTTAAAGAC30.1162340178225494No Hit
ATCTCTTTTTTCATAGTCTTCCCAGTTGTTTATACAGTTGCGTGGGGTAA30.1162340178225494No Hit
TCTTCTTCTTTAGTTTCTTTATTGCTGGTTGGAAAGCAAACTGATACACA30.1162340178225494No Hit
CCCTGTCAAGCTGGGCAAAGCGCCGTGTCTGAGAGGCAGGCAGCTAACCG30.1162340178225494No Hit
TCTTCAACAGATTAGTGGGATTATCCATATGAACAAAGTGTTCTATGTGA30.1162340178225494No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)