FastQCFastQC Report
Wed 8 May 2024
EGAF00007498795

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007498795
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences944915
Total Bases95.4 Mbp
Sequences flagged as poor quality0
Sequence length101
%GC75

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTTTCTCTCCTCCCCCCTCCTCCCCCCTCCCCCCCCCCCCCCCCCCCCC15480.16382425932491282No Hit
TCTTTCTCTCCCCCCCCCTCCTCCCCCCTCCCCCCCCCCCCCCCCCCCCC10900.1153542911267151No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)