FastQCFastQC Report
Fri 16 Dec 2022
EGAF00007539197

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007539197
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67860434
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTTATGTGATAGATGCCTCTTTAAAATATCTAAGTGCTGGGGTTATGA940650.13861538227120682No Hit
CCCATTTTTAGTTATAATGATGCCTTATGTGATAGATGCCTCTTTAAAAT902360.13297291909450507No Hit
CTTATGTGATAGATGCCTCTTTAAAATATCTAAGTGCTGGGGTTATGAGT720890.10623126872427607No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)