FastQCFastQC Report
Fri 16 Dec 2022
EGAF00007539211

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007539211
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61106734
Sequences flagged as poor quality0
Sequence length101
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGCGCTCTAATCTCGTATG1561280.25550048215635285TruSeq Adapter, Index 16 (97% over 35bp)
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG813870.13318826694288718No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)