FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007543467

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007543467
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences149617
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT21901.4637374095189717No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT8540.5707907523877633No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA3480.23259388973178183No Hit
GCAACAATAACTGGAGAGATACATATATTTCATATATATAGAAATGACGGG2340.1563993396472326No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC2230.14904723393731995No Hit
CCTTCTTCTTCTCTTTCGAACGCTCTACTGCAGGTAGAAGGCGAAGAAGGA2180.1457053677055415No Hit
GAGTGAATGGGGCGGTTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2030.13567976901020606No Hit
CCTCACATACACATGTTTATATGTAGAATATGAGAAATTAACAACGATGAA1950.1303327830393605No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA1800.12030718434402508No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1540.10292947993877702No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)