FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007543470

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007543470
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95777
Sequences flagged as poor quality0
Sequence length51
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT12761.3322613988744687No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT5500.5742506029631331No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA1820.19002474498052768No Hit
GCAACAATAACTGGAGAGATACATATATTTCATATATATAGAAATGACGGG1730.18062791693204003No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC1580.16496653685122734No Hit
ACATGAGTAGGCGTTCTCCTTGTAATCTCTCCTTCTTCTTCTCTTTCGAAC1480.1545256167973522No Hit
TACATGAGTAGGCGTTCTCCTTGTAATCTCTCCTTCTTCTTCTCTTTCGAA1440.1503492487758021No Hit
GATATATAGCCATGTAAAGGTGCATGGCAAAAATGCGACTCCTACAGCTAG1350.14095242072731448No Hit
GCTATCATGAGGGAGCGGGTCGGGGACCGGCTGCCAAGCTTCACAGAGCAG1170.12215876463033921No Hit
GTGAATGGGGAGCGGTTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1040.10858556856030152No Hit
TCCACGATGGAGATGAAGAAGATCGCCTGCGCCGTCCTCGTCGCCGCCGCC1020.10649738454952651No Hit
CCTTCTTCTTCTCTTTCGAACGCTCTACTGCAGGTAGAAGGCGAAGAAGGA1010.10545329254413899No Hit
GAGTGAATGGGGCGGTTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA990.10336510853336398No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)