FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007543496

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007543496
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences94168
Sequences flagged as poor quality0
Sequence length51
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT9861.0470648203211281No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT4410.4683119531050888No Hit
GCAACAATAACTGGAGAGATACATATATTTCATATATATAGAAATGACGGG1940.20601478209158103No Hit
ACATGAGTAGGCGTTCTCCTTGTAATCTCTCCTTCTTCTTCTCTTTCGAAC1600.16990909863223175No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA1380.1465465975702999No Hit
GCTATCATGAGGGAGCGGGTCGGGGACCGGCTGCCAAGCTTCACAGAGCAG1320.1401750063715912No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC1100.11681250530965934No Hit
TACATGAGTAGGCGTTCTCCTTGTAATCTCTCCTTCTTCTTCTCTTTCGAA1060.11256477784385355No Hit
CCTCACATACACATGTTTATATGTAGAATATGAGAAATTAACAACGATGAA990.10513125477869341No Hit
CCTTCTTCTTCTCTTTCGAACGCTCTACTGCAGGTAGAAGGCGAAGAAGGA950.1008835273128876No Hit
GTGAATGGGGAGCGGTTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA950.1008835273128876No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)