FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007543506

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007543506
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences197090
Sequences flagged as poor quality0
Sequence length51
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT26861.3628291643411639No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11300.5733421279618448No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA4010.20346034806433608No Hit
CCTTCTTCTTCTCTTTCGAACGCTCTACTGCAGGTAGAAGGCGAAGAAGGA3830.19432746461007663No Hit
GCAACAATAACTGGAGAGATACATATATTTCATATATATAGAAATGACGGG3580.18164290425693844No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC2840.1440966056116495No Hit
ACATGAGTAGGCGTTCTCCTTGTAATCTCTCCTTCTTCTTCTCTTTCGAAC2400.12177177939012634No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA2210.11213151352174133No Hit
GAGTGAATGGGGCGGTTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2170.11010198386523923No Hit
TACATGAGTAGGCGTTCTCCTTGTAATCTCTCCTTCTTCTTCTCTTTCGAA2150.10908721903698819No Hit
GTGAATGGGGAGCGGTTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2120.1075650717946116No Hit
CCCAGCCATCTGGTCACTGCGACTCCCGACAGCTCCATCCGCAAGGGACTT2050.10401339489573291No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)