FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007543514

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007543514
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8106
Sequences flagged as poor quality0
Sequence length51
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT530.6538366641993585No Hit
GCTATCATGAGGGAGCGGGTCGGGGACCGGCTGCCAAGCTTCACAGAGCAG290.35775968418455467No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT200.2467308166790032No Hit
CATGATAGCTGGGTAATCTCCCCGTGTTAAGGGATCCATGTACCATCCAAA200.2467308166790032No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCC200.2467308166790032No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC190.23439427584505307No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCC170.20972119417715274No Hit
ACATGAGTAGGCGTTCTCCTTGTAATCTCTCCTTCTTCTTCTCTTTCGAAC120.1480384900074019No Hit
GCTACCAGGTGGGATTCCTCGCGCCTGGTCGGTGCACTTCCACGCCGGGCC110.13570194917345177No Hit
ATTATTGGGTGGGGGTAAACATCGAACGGATCAACACCCCTGCACCAACCG110.13570194917345177No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCC100.1233654083395016No Hit
CCTCACGTCCACTCCATCCAAGCTGATAGATTCCCAAAGTTTCTCGAGATG90.11102886750555144No Hit
TACATGAGTAGGCGTTCTCCTTGTAATCTCTCCTTCTTCTTCTCTTTCGAA90.11102886750555144No Hit
CCTTGTAGTCTACGAAGTGCAGGCCGAACCGAGAAGTGTAGCCACTAGCCC90.11102886750555144No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)