FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007543518

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007543518
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences167398
Sequences flagged as poor quality0
Sequence length51
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT18261.0908135103167302No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT8360.4994085950847681No Hit
TGTATAGCCTATTATTCTTCAAGAAAACATGTTTTATTATTGATGAGGTGC2890.17264244495155256No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA2780.16607127922675302No Hit
ACATGAGTAGGCGTTCTCCTTGTAATCTCTCCTTCTTCTTCTCTTTCGAAC2370.14157875243431822No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC2200.1314233144959916No Hit
CCTTCTTCTTCTCTTTCGAACGCTCTACTGCAGGTAGAAGGCGAAGAAGGA2070.12365739136668301No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)