FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007543524

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007543524
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences218136
Sequences flagged as poor quality0
Sequence length51
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT29901.3707045146147356No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT13630.6248395496387574No Hit
CCTTCTTCTTCTCTTTCGAACGCTCTACTGCAGGTAGAAGGCGAAGAAGGA4040.18520555983423187No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA3990.18291341181648146No Hit
GCAACAATAACTGGAGAGATACATATATTTCATATATATAGAAATGACGGG3350.1535739171892764No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC3120.1430300363076246No Hit
TCATTTAGGAGACGATTAAAAGATACACTGGATGAGAACGTGCATGGCAGC3060.14027945868632413No Hit
ACATGAGTAGGCGTTCTCCTTGTAATCTCTCCTTCTTCTTCTCTTTCGAAC2760.12652657057982175No Hit
TACATGAGTAGGCGTTCTCCTTGTAATCTCTCCTTCTTCTTCTCTTTCGAA2510.1150658304910698No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2440.11185682326621924No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)