FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007543544

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007543544
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125274
Sequences flagged as poor quality0
Sequence length51
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT12270.9794530389386465No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT5140.41030062103868326No Hit
GCAACAATAACTGGAGAGATACATATATTTCATATATATAGAAATGACGGG3440.2745980810064339No Hit
GCTATCATGAGGGAGCGGGTCGGGGACCGGCTGCCAAGCTTCACAGAGCAG2030.16204479780321535No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC1500.11973753532257292No Hit
CCTTGTAGTCTACGAAGTGCAGGCCGAACCGAGAAGTGTAGCCACTAGCCC1470.11734278461612145No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA1450.11574628414515381No Hit
CCAGTCGTGCATAGACATGTGCACCGAGGCTTGCCTCCCCGCCGGTGGTGT1420.11335153343870236No Hit
CCGTATTGATCTTCTAGGCCTTGAGGAGAGTCCCAGTGGAAGAGAGTCACG1410.11255328320321854No Hit
GCCATTGCCGGCTTCGGCTGCCTGGACGACTGCAACGCCCGCTGCTCTAAC1410.11255328320321854No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)