FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007543601

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007543601
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences729046
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTAGAGTGCAGTGGTTCGCTGGATCTCAGCTCACTGCAACCTCTGCCTTA31660.434266150558401No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT27240.3736389747697676No Hit
GCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGTTCGAGACC16920.2320841208922345No Hit
GCCACTCAGGAGGGCTGAGGCAGGAGAATCGCTTGAACTCGTAAGGCAGAG12290.16857646842586066No Hit
CCCAAAGTGCTGGAATTACAAGTGTGAGACTCATCTTTTTTTTTTTTTTTT11710.16062086617305357No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11380.15609440282231848No Hit
GCCTGACCAATGTGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAA9680.13277625828822873No Hit
CCTGAGTGGCTGGGATTACAGGCGCGCGCCACCACGCCCGACCAATTTTTT7600.10424582262298948No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)