FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007543657

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007543657
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences481242
Sequences flagged as poor quality0
Sequence length51
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACCCCAGTTCCTGCACCCTTCTCTCCCTGTCTCTTATACACATCTCCGAG203964.23820032333005No Hit
CCTGAGCCACTACCATGCTGCTATACGAGAGACTGTCTCTTATACACATCT176213.661567361119769No Hit
CCTGAGCCACTACCATGCTGTCTCTTATACACATCTCCGAGCCCACGAGAC79371.6492741697524322No Hit
TACCCCAGTTCCTGCACTCTTCTCTCCCTGTCTCTTATACACATCTCCGAG78661.6345206777463313No Hit
CATCATGGGCCAGAATGTTGCTGTCTCTTATACACATCTCCGAGCCCACGA49411.0267183662273867No Hit
TACCCCAGTTCCTGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCG27920.5801654884652628No Hit
AGTTCCTGCACCCTTCTCTCCCTGTCTCTTATACACATCTCCGAGCCCACG23570.48977437547013764No Hit
TACCCCAGTTCCTGCTTCTGCTCCCTGTCTCTTATACACATCTCCGAGCCC22330.46400771337497554No Hit
TACCCCAGTTCCTGCACCCTTCTGCTCCCTGTCTCTTATACACATCTCCGA21270.44198137319685316No Hit
CCTGAGCCACTACCATGCTGCTATACGAGCTGTCTCTTATACACATCTCCG19980.41517573279140224No Hit
GCTATACGAGAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGTA17280.3590709040358073No Hit
TACCCCAGTTCCTGCACTCTTCTGCTCCCTGTCTCTTATACACATCTCCGA11800.2451988812281555No Hit
TACCCCAGTTCCTGCACTCTCGCTGTCTCTTATACACATCTCCGAGCCCAC10810.22462711068443733No Hit
TACCCCAGTTCCTGCACCCTTCTCTCGCTGTCTCTTATACACATCTCCGAG8470.17600292576292176No Hit
CCTGAGCCACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGTACTAG8340.17330158215617092No Hit
TCTCTTATACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCC8310.17267819516999763No Hit
CAGTTCCTGCACCCTTCTCTCCCTGTCTCTTATACACATCTCCGAGCCCAC7310.15189862896422174No Hit
GCTGAGCCACTACCATGCTGCTATACGAGAGACTGTCTCTTATACACATCT5770.11989809700732687No Hit
CATCATGGGCCAGGATGAGAGCTGTCTCTTATACACATCTCCGAGCCCACG5530.11491100111794067No Hit
GTTCCTGCACCCTTCTCTCCCTGTCTCTTATACACATCTCCGAGCCCACGA5250.10909272258032342No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)