FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007543662

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007543662
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences845181
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TACCCCAGTTCCTGCACCCTTCTCTCCCTGTCTCTTATACACATCTCCGAG79940.9458329044311219No Hit
CCTGAGCCACTACCATGCTGCTATACGAGAGACTGTCTCTTATACACATCT69420.8213625247136412No Hit
TACCCCAGTTCCTGCACTCTTCTCTCCCTGTCTCTTATACACATCTCCGAG22910.2710661976547036No Hit
CCTGAGCCACTACCATGCTGTCTCTTATACACATCTCCGAGCCCACGAGAC21710.2568680554816069No Hit
TACCCCAGTTCCTGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCT13310.15748106026993036No Hit
CATCATGGGCCAGAATGTTGCTGTCTCTTATACACATCTCCGAGCCCACGA11560.13677543626749775No Hit
AGTTCCTGCACCCTTCTCTCCCTGTCTCTTATACACATCTCCGAGCCCACG10540.12470701542036558No Hit
CCTGAGCCACTACCATGCTGCTATACGAGCTGTCTCTTATACACATCTCCG10020.11855448714535703No Hit
TACCCCAGTTCCTGCTTCTGCTCCCTGTCTCTTATACACATCTCCGAGCCC9930.11748962648237476No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)