FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007543669

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007543669
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences448479
Sequences flagged as poor quality0
Sequence length51
%GC60

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACCCCAGTTCCTGCACCCTTCTCTCCCTGTCTCTTATACACATCTCCGAG116472.5970000825010757No Hit
CCTGAGCCACTACCATGCTGCTATACGAGAGACTGTCTCTTATACACATCT113872.53902635351934No Hit
TACCCCAGTTCCTGCACTCTTCTCTCCCTGTCTCTTATACACATCTCCGAG36850.8216661203757589No Hit
CCTGAGCCACTACCATGCTGTCTCTTATACACATCTCCGAGCCCACGAGAC35680.7955779423339778No Hit
CATCATGGGCCAGAATGTTGCTGTCTCTTATACACATCTCCGAGCCCACGA21250.4738237464853427No Hit
TACCCCAGTTCCTGCACCCTTCTGCTCCCTGTCTCTTATACACATCTCCGA12890.2874159102209914No Hit
TACCCCAGTTCCTGCTTCTGCTCCCTGTCTCTTATACACATCTCCGAGCCC12360.2755981885439452No Hit
TACCCCAGTTCCTGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCG10390.2316719400462452No Hit
AGTTCCTGCACCCTTCTCTCCCTGTCTCTTATACACATCTCCGAGCCCACG8640.19265116092392287No Hit
CCTGAGCCACTACCATGCTGCTATACGAGCTGTCTCTTATACACATCTCCG7520.16767786228563655No Hit
GCGTCAGATGTGTATAAGAGACAGCCTGAGCCACTACCATGCTGCTATACG6210.13846802191406954No Hit
TACCCCAGTTCCTGCACTCTTCTGCTCCCTGTCTCTTATACACATCTCCGA5810.12954898668611017No Hit
TACCCCAGTTCCTGCACTCTCGCTGTCTCTTATACACATCTCCGAGCCCAC5780.1288800590440132No Hit
TCTCTTATACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCC5140.11460960267927818No Hit
GCGTCAGATGTGTATAAGAGACAGTACCCCAGTTCCTGCACCCTTCTCTCC5100.11371769915648224No Hit
GCTATACGAGAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGTA5070.11304877151438529No Hit
TACCCCAGTTCCTGCACCCTTCTCTCGCTGTCTCTTATACACATCTCCGAG4780.10658247097411473No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)