FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007543696

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007543696
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences391047
Sequences flagged as poor quality0
Sequence length51
%GC64

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACCCCAGTTCCTGCACCCTTCTCTCCCTGTCTCTTATACACATCTCCGAG86082.2012699240756226No Hit
CCTGAGCCACTACCATGCTGCTATACGAGAGACTGTCTCTTATACACATCT72451.8527184711812135No Hit
TACCCCAGTTCCTGCACTCTTCTCTCCCTGTCTCTTATACACATCTCCGAG22850.5843287379777878No Hit
CCTGAGCCACTACCATGCTGTCTCTTATACACATCTCCGAGCCCACGAGAC21260.543668663869049No Hit
CATCATGGGCCAGAATGTTGCTGTCTCTTATACACATCTCCGAGCCCACGA11900.304311246474209No Hit
TACCCCAGTTCCTGCTTCTGCTCCCTGTCTCTTATACACATCTCCGAGCCC9520.2434489971793672No Hit
TACCCCAGTTCCTGCACCCTTCTGCTCCCTGTCTCTTATACACATCTCCGA7950.2033003705436942No Hit
TACCCCAGTTCCTGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGG7470.1910256311901127No Hit
AGTTCCTGCACCCTTCTCTCCCTGTCTCTTATACACATCTCCGAGCCCACG6270.16033878280615885No Hit
GCGTCAGATGTGTATAAGAGACAGCCTGAGCCACTACCATGCTGCTATACG5720.14627397729684669No Hit
CCTGAGCCACTACCATGCTGCTATACGAGCTGTCTCTTATACACATCTCCG5400.1380908177277923No Hit
GCGTCAGATGTGTATAAGAGACAGTACCCCAGTTCCTGCACCCTTCTCTCC4730.12095732738008474No Hit
TACCCCAGTTCCTGCACTCTCGCTGTCTCTTATACACATCTCCGAGCCCAC4310.1102169304457009No Hit
TCTCTTATACACATCTCCGAGCCCACGAGACGGACTCCTATCTCGTATGCC3990.10203377087664656No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)