FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007543703

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007543703
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences407109
Sequences flagged as poor quality0
Sequence length51
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACCCCAGTTCCTGCACCCTTCTCTCCCTGTCTCTTATACACATCTCCGAG78961.9395297082599499No Hit
CCTGAGCCACTACCATGCTGCTATACGAGAGACTGTCTCTTATACACATCT74051.818923187647534No Hit
TACCCCAGTTCCTGCACTCTTCTCTCCCTGTCTCTTATACACATCTCCGAG21880.5374482018329243No Hit
CCTGAGCCACTACCATGCTGTCTCTTATACACATCTCCGAGCCCACGAGAC21640.5315529747561464No Hit
CATCATGGGCCAGAATGTTGCTGTCTCTTATACACATCTCCGAGCCCACGA10940.26872410091646215No Hit
TACCCCAGTTCCTGCTTCTGCTCCCTGTCTCTTATACACATCTCCGAGCCC9850.24194994460942895No Hit
TACCCCAGTTCCTGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGT7930.19478812799520523No Hit
TACCCCAGTTCCTGCACCCTTCTGCTCCCTGTCTCTTATACACATCTCCGA7650.18791036307229758No Hit
AGTTCCTGCACCCTTCTCTCCCTGTCTCTTATACACATCTCCGAGCCCACG6950.17071595076502852No Hit
CCTGAGCCACTACCATGCTGCTATACGAGCTGTCTCTTATACACATCTCCG6940.1704703163034961No Hit
TACCCCAGTTCCTGCACTCTCGCTGTCTCTTATACACATCTCCGAGCCCAC4660.11446565907410546No Hit
GCGTCAGATGTGTATAAGAGACAGCCTGAGCCACTACCATGCTGCTATACG4600.11299185230491096No Hit
TCTCTTATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCC4370.10734225968966542No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)