FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007543704

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007543704
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences289728
Sequences flagged as poor quality0
Sequence length51
%GC64

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACCCCAGTTCCTGCACCCTTCTCTCCCTGTCTCTTATACACATCTCCGAG79752.752581731831235No Hit
CCTGAGCCACTACCATGCTGCTATACGAGAGACTGTCTCTTATACACATCT62642.162027833001988No Hit
TACCCCAGTTCCTGCACTCTTCTCTCCCTGTCTCTTATACACATCTCCGAG24820.8566655621824608No Hit
CCTGAGCCACTACCATGCTGTCTCTTATACACATCTCCGAGCCCACGAGAC22840.7883256019438922No Hit
CATCATGGGCCAGAATGTTGCTGTCTCTTATACACATCTCCGAGCCCACGA12920.44593549812237687No Hit
TACCCCAGTTCCTGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTA8640.2982107355864811No Hit
TACCCCAGTTCCTGCTTCTGCTCCCTGTCTCTTATACACATCTCCGAGCCC8580.2961398277004639No Hit
TACCCCAGTTCCTGCACCCTTCTGCTCCCTGTCTCTTATACACATCTCCGA7810.2695631764965761No Hit
AGTTCCTGCACCCTTCTCTCCCTGTCTCTTATACACATCTCCGAGCCCACG6990.2412607687210073No Hit
CCTGAGCCACTACCATGCTGCTATACGAGCTGTCTCTTATACACATCTCCG5900.20363927545836094No Hit
GCGTCAGATGTGTATAAGAGACAGCCTGAGCCACTACCATGCTGCTATACG4100.14151203887784403No Hit
TACCCCAGTTCCTGCACTCTCGCTGTCTCTTATACACATCTCCGAGCCCAC3990.13771537442014578No Hit
GCGTCAGATGTGTATAAGAGACAGTACCCCAGTTCCTGCACCCTTCTCTCC3970.13702507179147339No Hit
TACCCCAGTTCCTGCACTCTTCTGCTCCCTGTCTCTTATACACATCTCCGA3550.12252871658935277No Hit
TCTCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCC3540.12218356527501656No Hit
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA3390.1170062955599735No Hit
TACCCCAGTTCCTGCACCCTTCTCTCGCTGTCTCTTATACACATCTCCGAG3390.1170062955599735No Hit
GCTATACGAGAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACTAAG3150.10872266401590458No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)