FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007543705

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007543705
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences782994
Sequences flagged as poor quality0
Sequence length51
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TACCCCAGTTCCTGCACCCTTCTCTCCCTGTCTCTTATACACATCTCCGAG51120.6528785661192806No Hit
CCTGAGCCACTACCATGCTGCTATACGAGAGACTGTCTCTTATACACATCT43630.5572201064120543No Hit
CCTGAGCCACTACCATGCTGTCTCTTATACACATCTCCGAGCCCACGAGAC19410.24789461988214467No Hit
TACCCCAGTTCCTGCACTCTTCTCTCCCTGTCTCTTATACACATCTCCGAG16030.204726983859391No Hit
CATCATGGGCCAGAATGTTGCAGATTACATGCGCTACTTAATGGAAGAAGA10700.1366549424388948No Hit
CATCATGGGCCAGAATGTTGCTGTCTCTTATACACATCTCCGAGCCCACGA9580.1223508736976273No Hit
TACCCCAGTTCCTGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCG8240.10523707716789657No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)