FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007543719

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007543719
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences964466
Sequences flagged as poor quality0
Sequence length51
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TACCCCAGTTCCTGCACCCTTCTCTCCCTGTCTCTTATACACATCTCCGAG89890.9320183396822698No Hit
CCTGAGCCACTACCATGCTGCTATACGAGAGACTGTCTCTTATACACATCT66380.6882565067094122No Hit
CCTGAGCCACTACCATGCTGTCTCTTATACACATCTCCGAGCCCACGAGAC39830.41297464088936264No Hit
TACCCCAGTTCCTGCACTCTTCTCTCCCTGTCTCTTATACACATCTCCGAG35730.37046407027308376No Hit
CATCATGGGCCAGAATGTTGCTGTCTCTTATACACATCTCCGAGCCCACGA19000.19700020529495077No Hit
TACCCCAGTTCCTGCTTCTGCTCCCTGTCTCTTATACACATCTCCGAGCCC11090.11498590930110549No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)