FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007543848

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007543848
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences147759
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3390.22942764907721355No Hit
GCCCAGAAGACGGGTCCTCCAGTTCCAGTGACTCTTTCGGTGGAGCGTCAG1900.12858776791938226No Hit
GAGTACATGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGG1750.11843610203100996No Hit
ATTACTTTGCAAGGGGCCCTTCAGAAGTCGCTGGGCTCAGAAGGCTCTTAG1570.10625410296496321No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)