FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007543902

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007543902
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences267609
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT43351.6199006759862338No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT18540.6928018115982646No Hit
CCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGT14020.5238986730640599No Hit
CAGGTCAGGCGGGGCTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGA13140.4910148761812944No Hit
GAGTGAATGGGGAGACCTCAGGTCAGGCGGGGCTACCCGCTGAGTTTAAGC10900.40731066593425486No Hit
CCAATCGGGCGGTAAATTCCGTCCAAGGCTAAATACTGGCGAGAGACCGAT10440.39012140847280924No Hit
CTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGT9030.33743259755837807No Hit
ACCATGAAAATCGGTCGCCCTCGGCGTCCGAATTGTAGTCTGGAGAAGCGT8030.30006464655523546No Hit
GTGAATGGGGAGACCTCAGGTCAGGCGGGGCTACCCGCTGAGTTTAAGCAT7380.2757754784031927No Hit
GCTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACA6650.2484968741708986No Hit
CCTTCCAGGGGACTTGGGCCCGGTCCGCCACTGAGGACGCTTCTCCAGACT6110.2283181806292016No Hit
CGCGGTACTTGTTCGCTATCGGTCTCTCGCCAGTATTTAGCCTTGGACGGA6100.22794450111917014No Hit
GACCTCAGGTCAGGCGGGGCTACCCGCTGAGTTTAAGCATATCAATAAGCG6060.2264497830790444No Hit
CCATGAAAATCGGTCGCCCTCGGCGTCCGAATTGTAGTCTGGAGAAGCGTC5490.20515005100725311No Hit
GGTCAGGCGGGGCTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAA5250.19618174276649888No Hit
CCTGGAAGGGGGCGCCAGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTG5110.19095022962605893No Hit
AGGTCAGGCGGGGCTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAA4680.17488201069470757No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC4510.16852945902417332No Hit
GCCAGTTAAGGACAGGAGCGCATCGCCGGCAGAAGGGACGAGCCGACCGGT4260.15918747127338767No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT4250.15881379176335622No Hit
GCGGTACTTGTTCGCTATCGGTCTCTCGCCAGTATTTAGCCTTGGACGGAA4210.15731907372323053No Hit
GGTATCAACGCAGAGTGAATGGGGAGACCTCAGGTCAGGCGGGGCTACCCG4170.15582435568310482No Hit
AGACCTCAGGTCAGGCGGGGCTACCCGCTGAGTTTAAGCATATCAATAAGC4060.15171388107275913No Hit
ATTTTCATGGTGGGCTTTTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCT4060.15171388107275913No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCC3900.14573500891225633No Hit
GTATCAACGCAGAGTGAATGGGGAGACCTCAGGTCAGGCGGGGCTACCCGC3710.1386350982216592No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA3600.1345246236113135No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA3590.1341509441012821No Hit
CTCTGGCGCCCCCTTCCAGGGGACTTGGGCCCGGTCCGCCACTGAGGACGC3440.1285457514508107No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCC3400.127051033410685No Hit
ATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGA3370.1259299948805907No Hit
GTGAATGGGGAGCCCACAGGCCGACGCCAGGAGCGCGCAGGTGCCGAGGCA3370.1259299948805907No Hit
AGTGAATGGGGAGACCTCAGGTCAGGCGGGGCTACCCGCTGAGTTTAAGCA3320.12406159733043358No Hit
GCTTATTGATATGCTTAAACTCAGCGGGTAGCCCCGCCTGACCTGAGGTCT3160.11808272516993076No Hit
CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTG3110.11621432761977361No Hit
GCGCCAGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGA3040.11359857104955365No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG2880.1076196988890508No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)