FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007544010

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007544010
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences936561
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTTGGGTGGGTGTGGGTATAATACTAAGTTGAGATGATATCATTTACG13420.14329018611708152No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT12630.13485507083895232No Hit
TCATAATCGGAGGCTTTGGCAACTGACTAGTTCCCCTAATAATCGGTGCCC12600.13453475000560564No Hit
GCTAAGGGAGGGTAGACTGTTCAACCTGTTCCTGCTCCGGCCTCCACTATA10550.11264615972691583No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)