FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007544123

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007544123
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18627
Sequences flagged as poor quality0
Sequence length51
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT4032.163526064315241No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1750.9394964299135663No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCC580.31137595962849623No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC520.27916465346003116No Hit
ACTCTGATTAAGTTTCGAGTGTTTAAAGTTCAGGAGGTGCATCAATTGCGT500.2684275514038761No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA480.25769044934772106No Hit
GTGAATGGGGAGCGGTTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA480.25769044934772106No Hit
CCTCATCACAGCTTGTCTTTAACACGAAGCATTTCACTCTGGTCAGACTCA460.246953347291566No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCC420.2254791431792559No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCC390.20937349009502335No Hit
CTCCATGGGGAACTTTACTTTCATTACGCCTATAAGTTTTAACACTCATTG360.19326783701079078No Hit
GAGTGAATGGGGCGGTTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA350.18789928598271327No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC330.17716218392655822No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAC310.16642508187040317No Hit
GTAAAGGGGAAGGTTATCGCTTAGACCGCAGGAGCAAAGTTTCATCCATAC310.16642508187040317No Hit
GAGTGAATGGGGCGGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA290.15568797981424812No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA290.15568797981424812No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA280.1503194287861706No Hit
GCTCGTAGGTGGTTGATCGCGTCGGAAGTGTAATCTTGGGGCTTAACCCTG280.1503194287861706No Hit
CCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGAACCT270.1449508777580931No Hit
GGTCGAATAAGGAGGGAGTTTAAGGTAATTAGCACAGGTCATTACGCTAGG270.1449508777580931No Hit
GATATATAGCCATGTAAAAGTGCATGGCCATGCATGCGTGCATGGCAAAAA270.1449508777580931No Hit
GTTTACTAGGGAATTTTATTTTTTTTTCTGGTCCGGGGGTGGTTGTTTATG260.13958232673001558No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT260.13958232673001558No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCCC260.13958232673001558No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAC260.13958232673001558No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCCC260.13958232673001558No Hit
CCTAGTAAACAGGCCTAGGCAAATACAAAAGAAAACAAAACGTGAAGGTCA250.13421377570193804No Hit
GAGTGAATGGGGAGCGGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA250.13421377570193804No Hit
TACATGAGTAGGCGTTCTCCTTGTGCTCTCTCCTTCTTCTTCTCTTTCGAA240.12884522467386053No Hit
GAGTGAATGGGGAGCGGTTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA240.12884522467386053No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCC230.123476673645783No Hit
GCAACAATAACTGGAGAGATACATATATTTCATATATATAGAAATGACGGG230.123476673645783No Hit
GAGTGAATGGGAAGGTAAACAAAGAGAAAATGGACACGATCAACCCTAAAA220.11810812261770548No Hit
CATAAAAATCACCCCAAGAACACTACTAGGTAGTGCCCCTGAAAATTTCAT220.11810812261770548No Hit
ACATGAGTAGGCGTTCTCCTTGTGCTCTCTCCTTCTTCTTCTCTTTCGAAC210.11273957158962795No Hit
GTGAATGGGGAGCGGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA210.11273957158962795No Hit
ATTGCCAGAGGCAGGTTTCAGACGACTCGGTGAGAATCGCTGCCGCCGCCT210.11273957158962795No Hit
AGTGAATGGGGAGCGGTTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA210.11273957158962795No Hit
GCTCTAGTCATAAGTATAATATACCCCATAAAAATCACCCCAAGAACACTA200.10737102056155043No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCC200.10737102056155043No Hit
GAAAATGAGGAGGACAGCTGATTAGTTGTGGAAACAGGAGTGGTTGCAGAA200.10737102056155043No Hit
ATATATAAAGGGATGAGATCCCCATTGTAAAGATAGATTTTTGCGATTGAA200.10737102056155043No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCC190.1020024695334729No Hit
GCAATTGGAGCCATTTATTCTCCTGGCTCAACGTAAAGAAAAAGAAAGAAG190.1020024695334729No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACC190.1020024695334729No Hit
CCTTAACTTTAGGGATTATTATGACATGCGTAGGAGCCTGAGGAGCAATGT190.1020024695334729No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)