FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007544222

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007544222
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences206515
Sequences flagged as poor quality0
Sequence length51
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT32681.5824516378955524No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT17820.8628913154008183No Hit
CATCTTGAGGTGGGTTTCACACTTAGATGCTTTCAGCGTTTATCCCTTCCC9180.44451976853981556No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT5610.27165096966322055No Hit
TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT4900.23727090041885576No Hit
CCCTACATAGCTACCCAGCGATGCCTTTGGCAAGACAACTGGTACACCAGC3900.18884826768031376No Hit
GGTATCAACGCAGAGTACATGGGAAATCTCATCTTGAGGTGGGTTTCACAC3810.18449023073384502No Hit
ATCTTGAGGTGGGTTTCACACTTAGATGCTTTCAGCGTTTATCCCTTCCCT3750.1815848727695325No Hit
GAGTACATGGGGTCTTTCCGTCTTTCCGCGGGGAGATTGCATCATCACAAA3340.16173159334673026No Hit
GTATCAACGCAGAGTACATGGGAAATCTCATCTTGAGGTGGGTTTCACACT3210.1554366510907198No Hit
TCCCTACATAGCTACCCAGCGATGCCTTTGGCAAGACAACTGGTACACCAG2510.1215408081737404No Hit
GAGTACATGGGAAATCTCATCTTGAGGTGGGTTTCACACTTAGATGCTTTC2500.12105658184635498No Hit
ATCCGTCGCGGGCGTAGGAAATTTGAGAGGATCTGCTCCTAGTACGAGAGG2490.12057235551896955No Hit
CTTTCCGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCTGAGTCT2440.11815122388204247No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)