FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007544345

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007544345
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences456665
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT114722.5121259566640757No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT46731.0232884061620662No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT19240.4213154062606068No Hit
TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT14840.32496468965215203No Hit
ACAGATGATAGGATGTTTCATGTGGTGTATGCATCGGGGTAGTCCGAGTAA5510.12065737466195132No Hit
GCTAAGGGAGGGTAGACTGTTCAACCTGTTCCTGCTCCGGCCTCCACTATA4920.10773761948036306No Hit
CATCAATAGATGGAGACATACAGAAATAGTCAAACCACATCTACAAAATGC4740.10379599925547174No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)